Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930366.1_cds_XP_016477399.1_69136
CDS Infomation

[gene=LOC107798882] [db_xref=GeneID:107798882] [protein=calcium-dependent protein kinase 21-like] [protein_id=XP_016477399.1] [location=complement(join(11351..11425,11503..11602,12661..12788,12891..13058,13898..14010,17295..17447,17539..17682,19109..19832))] [gbkey=CDS]
Sequence

ATGGGTGGTTGTTTTAGCAAGAAGTATACACGAGAAGGTGCTAAGGGGGGTTATAGGGCA
ACAAGAAGAAATGTTAATCAAGAATATAAAAAAACACCACAACCTCAACCAGAAAGGCCA
TATCAGCCACAGCCACAACCTCAGCCTCAGCCACAAGCACACACTGTTACCGCGCAGCCG
GCACAAACCCAAGACCAAATGCAAGGACCCCATTTGAATAACATATTAGGAAAGCCTTTT
GAAGATATTCGGAAGCACTATACACTTGGTAAAGAATTGGGTAGGGGTCAGTTTGGAGTG
ACATATCATTGTACTGAGAATTCGACGGGGAACCCTTATGCTTGTAAGTCTATATTGAAA
AGGAAGCTTGTGAGTAAGAATGATAGGGAGGATATGAAGAGGGAAATTCAAATTATGCAG
CATTTAAGTGGCCAGCCGAACATCGTGGAATTTAAAGGCGCATATGAGGATAGGCATTCG
GTGCACCTCGTGATGGAACTTTGTGCTGGAGGAGAGTTGTTTGATAGGATTATTGCTCGG
GGATATTATTCGGAGAAGGATGCTGCTGAGATTATTAGACAGATTGTAAATGTTGTTAAC
ATTTGCCATTTCATGGGTGTTATGCATAGGGATCTTAAGCCAGAGAATTTCTTACTGACT
AGTAAGGATGAAAATGCAATGCTCAAGGCAACCGATTTTGGACTTTCTGTCTTCATTGAA
GAAGGGAAGGTGTACCGTGATATAGTTGGTAGTGCATATTATGTTGCCCCTGAAGTATTG
CGGCGTAGTTATGGGAAGGAAGCAGATGTATGGAGTGCAGGTGTTATTTTGTATATTCTA
CTCAGTGGTGTGCCTCCATTTTGGGCTGAAACTGAAAAGGGAATATTTAATGCCATACTA
AAAGGAGAAATTGACTTTGAAAGTGATCCATGGCCATCCATATCAAATAGTGCCAAGGAC
CTTATAAGAAAAATGCTGACGCAGGAGCCAAAGAAGAGAATTACTTCAGCACAAGTTCTT
GAACATCCATGGCTTCGAATGGGAGAAGCATCAGACAAGCCAATAGACAGTGCAGTGCTG
TCCAGAATGAAGCAGTTTAGGGCAATGAACAAGCTCAAGAAACTTGCATTGAAGGTCATT
GCGGAAAATTTATCTGAAGAAGAAATCAAGGGTTTGAAAGCTATGTTTGCAAACATTGAT
ACAGACAATAGTGGCACAATCACTTATGAAGAATTGAAGTCAGGATTGGCTCGGCTTGGA
TCAAAGCTAACGGAGACCGAAGTCAAGCAACTCATGGAAGCTGCTGATGTGGATGGAAAT
GGAACAATCGATTACATCGAGTTTATTACTGCAACAATGCATAGACATCGGCTTGAAAGG
GATGAGCATCTCTTTAAAGCTTTTCAGTATTTTGACAAGGACCATAGTGGCTTCATCACG
AGAGATGAATTGGAAAGCGCCATGAAGGAGTATGGTATGGGTGATGAGGCGACCATAAAG
GAAATAATTGCAGAGGTGGACACTGACAATGATGGTAGGATCAATTATGAGGAGTTCTGT
GCTATGATGAGAAGTGGAACACAACCACAGCCGAAGCTTTTCTAG

Peptide Sequence

PEP ID

XP_016477399.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 21-like [Nicotiana tabacum]
Sequence

MGGCFSKKYTREGAKGGYRATRRNVNQEYKKTPQPQPERPYQPQPQPQPQPQAHTVTAQP
AQTQDQMQGPHLNNILGKPFEDIRKHYTLGKELGRGQFGVTYHCTENSTGNPYACKSILK
RKLVSKNDREDMKREIQIMQHLSGQPNIVEFKGAYEDRHSVHLVMELCAGGELFDRIIAR
GYYSEKDAAEIIRQIVNVVNICHFMGVMHRDLKPENFLLTSKDENAMLKATDFGLSVFIE
EGKVYRDIVGSAYYVAPEVLRRSYGKEADVWSAGVILYILLSGVPPFWAETEKGIFNAIL
KGEIDFESDPWPSISNSAKDLIRKMLTQEPKKRITSAQVLEHPWLRMGEASDKPIDSAVL
SRMKQFRAMNKLKKLALKVIAENLSEEEIKGLKAMFANIDTDNSGTITYEELKSGLARLG
SKLTETEVKQLMEAADVDGNGTIDYIEFITATMHRHRLERDEHLFKAFQYFDKDHSGFIT
RDELESAMKEYGMGDEATIKEIIAEVDTDNDGRINYEEFCAMMRSGTQPQPKLF

Transcript Sequence

Gene sequence data has not been registered.